The plot begins in the middle of the Fourth Shinobi World War fought by the Allied Shinobi Forces from the ninja villages where the ninja Naruto Uzumaki reveals the villain Tobi leading Akatsuki is Obito Uchiha, the presumed-dead best friend of Naruto's mentor Kakashi Hatake. As Obito and his partner Madara Uchiha manage to awake the legendary beast, the Ten Tails, Naruto's partner Sasuke Uchiha has the late Konohagakure leaders, the Hokages, reanimated to learn about their village's origins. After realising that both his late brother Itachi Uchiha and First Hokage Hashirama Senju fought to protect the village regardless of the cost, Sasuke's team and the reanimated Hokage go to aid Naruto's group. In the fight, Naruto and Sasuke manage to defeat Obito after their enemy absorbed the powers of all Tailed Beasts. Madara tries to defeat the Hokages, but when he tries to kill Naruto and Sasuke, the two ninjas awake new powers inherited from the Sage of the Six Paths. The duo then defeats Madara who is instead backstabbed by his partner Zetsu to turn him into the Sage's mother, Kaguya. With the help of Kakashi and Sakura Haruno, Naruto and Sasuke manage to seal Kaguya though Obito dies in the battle trying to protect Kakashi. In the aftermath, Naruto and Sasuke engage in a final battle to decide the villages' status quo. Amazed by Naruto's decision, Sasuke gives up and leaves Konohagakure. The game ends with a time skip where Naruto has become the new Hokage and Sasuke returns to the village.
|Action-Adventure||Ninja Council • Ninja Council 2 (GBA) • Ninja Council 2 (DS) • Ninja Council 3 • Ninja Council 4 • Dairansen! Kage Bunsen Emaki • Naruto vs. Sasuke • Dragon Blade Chronicles • The New Era • Powerful Shippuden|
|Konoha Senki • Path of the Ninja • RPG 2: Chidori vs. Rasengan • Path of the Ninja 2|
|Clash of Ninja • Clash of Ninja 2 • Gekitō Ninja Taisen! 4 • Gekitō Ninja Taisen EX|
Gekitō Ninja Taisen EX2 • Gekitō Ninja Taisen EX3 • Gekitō Ninja Taisen Special
Ninja Destiny • Ninja Destiny 2 • Clash of Ninja Revolution • Clash of Ninja Revolution 2
Clash of Ninja Revolution 3 • Shinobi Retsuden 3 • Shinobi Rumble • Ultimate Ninja Storm Trilogy (1/2/3) • Ultimate Ninja Storm 4
|Cross-over games||Battle Stadium D.O.N • Jump Super Stars • Jump Ultimate Stars • Jump Force|